Publications

Schauder DM, Kuybeda O, Zhang J, Klymko K, Bartesaghi A, Borgnia MJ, Mayer ML, and Subramaniam S.
Glutamate receptor desensitization is mediated by changes in quaternary structure of the ligand binding domain.
Proc Natl Acad Sci U S A. 2013 Apr 9;110(15):5921-6. doi: 10.1073/pnas.1217549110. Epub 2013 Mar 25.

PubMed

Harris AK, Meyerson JR, Matsuoka Y, Kuybeda O, Moran A, Bliss D, Das SR, Yewdell JW, Sapiro G, Subbarao K, and Subramaniam S.
Structure and accessibility of HA trimers on intact 2009 H1N1 pandemic influenza virus to stem region-specific neutralizing antibodies.
Proc Natl Acad Sci U S A. 2013 Mar 19;110(12):4592-7. doi: 10.1073/pnas.1214913110. Epub 2013 Mar 4.

PubMed

Milne JLS, Borgnia MJ, Bartesaghi A, Tran EEH, Earl LA, Schauder DM, Lengyel J, Pierson J, Patwardhan A, and Subramaniam S.
Cryo-electron microscopy: A primer for the non-microscopist.
FEBS J. 2013 Jan;280(1):28-45. doi: 10.1111/febs.12078.

PubMed

Meyerson JR, Tran EEH, Kuybeda O, Chen W, Dimitrov DS, Gorlani A, Verrips T, Lifson JD, and Subramaniam S.
Molecular structures of trimeric HIV-1 Env in complex with small antibody derivatives.
Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):513-8. doi: 10.1073/pnas.1214810110.

PubMed

Milne, JLS.
Structure and Regulation of Pyruvate Dehydrogenases.
The Encyclopedia of Biological Chemistry. Lennarz WJ and Lane MD, eds. (2013) vol. 4, pp. 321-328. Waltham, MA: Academic Press.

ScienceDirect

Karnik S and Subramaniam S.
There is no overkill in biochemistry.
Resonance J Sci Edu. 2012 Dec;17(12)1157-64. doi: 10.1007/s12045-012-0132-6.

SpringerLink

Bartesaghi A, Lecumberry F, Sapiro G, and Subramaniam S.
Protein secondary structure determination by constrained single particle cryo-electron tomography.
Structure. 2012 Dec 5;20(12):2003-13. doi: 10.1016/j.str.2012.10.016.

PubMed

Patwardhan A, Carazo JM, Carragher B, Henderson R, Heymann JB, Hill E, Jensen GJ, Lagerstedt I, Lawson CL, Ludtke SJ, Mastronarde D, Moore WJ, Roseman A, Rosenthal P, Sorzano CO, Sanz-Garcia E, Scheres SH, Subramaniam S, Westbrook J, Winn M, Swedlow JR, and Kleywegt GJ.
Data management challenges in three-dimensional EM.
Nat Struct Mol Biol. 2012 Dec 5;19(12):1203-7. doi: 10.1038/nsmb.2426.

PubMed

Kuybeda O, Frank GA, Bartesaghi A, Borgnia M, Subramaniam S, and Sapiro G.
A collaborative framework for 3D alignment and classification of heterogeneous subvolumes in cryo-electron tomography.
J Struct Biol. 2013 Feb;181(2):116-27. doi: 10.1016/j.jsb.2012.10.010. Epub 2012 Oct 27.

PubMed

Yoo TS, Bliss D, Lowekamp BC, Chen DT, Muphy GE, Narayan K, Hartnell LM, Do T, and Subramaniam S.
Visualizing cells and humans in 3D: Biomedical image analysis at nanometer and meter scales.
IEEE Comput Graph. 2012 Sep; 32(5):39-49.

IEEE Xplore

Pages