Publications

Gopinath A, Xu G, Ress D, Oktem O, Subramaniam S, Bajaj C.
Shape-based regularization of electron tomographic reconstruction.
IEEE Trans Med Imaging. 2012 Dec;31(12):2241-52. doi: 10.1109/TMI.2012.2214229. Epub 2012 Aug 20.

PubMed

Tran EEH, Borgnia MJ, Kuybeda O, Shauder DM, Bartesaghi A, Frank GA, Sapiro G, Milne JLS, Subramaniam S.
Structural mechanism of trimeric HIV-1 envelope glycoprotein activation.
PLoS Pathog. 2012 Jul;8(7): e1002797.

PubMed

Venkatesh MJ and Subramaniam S.
Chemoreceptor arrays.
Encyclopedia of Biophysics. Gordon GKC, ed. Springer (NY); 2013. pp. 293-296.
doi: 10.1007/978-3-642-16712-6_79.

SpringerReference

Narayan K, Prosa T, Fu J, Kelly TF, and Subramaniam S.
Chemical mapping of mammalian cells by atom probe tomography.
J Struct Biol. 2012 May;178(2):98-107.

PubMed

Frank GA, Bartesaghi A, Kuybeda O, Borgnia MJ, White TA, Sapiro G and Subramaniam S.
Computational separation of conformational heterogeneity using cryo-electron tomography and 3D sub-volume averaging.
J Struct Biol. 2012 May;178(2):165-76.

PubMed

White TA, Bartesaghi A, Borgnia MJ, de la Cruz MJ, Nandwani R, Hoxi, JA, Bess JW, Lifson JD, Milne JLS and Subramaniam S.
3D structures of sCD4-bound states of trimeric SIV envelope glycoproteins determined using cryo-electron tomography.
J Virol. 2011 Dec;85(23): 12114-23.

PubMed

Murphy GE, Narayan K, Lowekamp BC, Hartnell LM, Heymann JAW, Fu J and Subramaniam S.
Correlative 3D imaging of Whole Mammalian Cells with Light and Electron Microscopy.
J Struct Biol. 2011 Dec;176(3):268-78.

PubMed

Meyerson JR, White TA, Bliss D, Moran A, Bartesaghi A, Borgnia MJ, de la Cruz MJ, Schauder D, Hartnell LM, Nandwani R, Dawood M, Kim B, Kim JH, Sununu J, Yang L, Bhatia S, Subramaniam C, Hurt DE, Gaudreault L, Subramaniam S.
Determination of Molecular Structures of HIV Envelope Glycoproteins using Cryo-Electron Tomography and Automated Sub-tomogram Averaging.
J Vis Exp. 2011 Dec 1;(58). pii: 2770, doi: 10.3791/2770.

PubMed

Nikolic DS, Lehmann M, Felts RL, Garcia E, Blanchet FB, Subramaniam S and Piguet V.
HIV-1 activates Cdc42 and induces filopodia in immature dendritic cells to facilitate cell-to-cell virus propagation.
Blood. 2011 Nov 3;118(18):4841-52.

PubMed

Harris A, Borgnia MJ, Shi D, Bartesaghi A, He H, Pejchal R, Kang K, Depetris R, Marozsan A, Sanders RW, Klasse PJ, Milne JLS, Wilson IA, Olson W, Moore JP and Subramaniam S.
Trimeric HIV-1 gp140 immunogens and native HIV-1 envelope glycoproteins display the same closed and open quaternary molecular architectures.
Proc Natl Acad Sci U S A. 2011 Jul 12;108(28):11440-5.

PubMed

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